The throttle magnet likely ss49 linear type has no effect on the hub sensing, the throttle simply sends a signal to the controller to operate the motor.
The halls in the hub sense the hub magnets approx. 20, each one is usually orientated N,S,N,S,N,S etc,etc so it needs to be bipolar to sense them.
The linear hall (throttle) detects either N or S depending on it's orientation.
The halls sense magnets differently so do a different job.
Although most hubs use 5v there is the odd one that uses 12v, ss41 voltage range is 2.5 - 24v approx., SS49 is 2.5 - 6.4v approx.