I checked those several times :-( but maybe they're being pulled somehow when riding, as my wiring set-up is very messy it has to be said, and there's a lot of stuff in the rack bag alongside the controller and wiring.. I've stopped though many times, and checked and double checked, and all the connections seem firm. The only way to be sure is doing a proper wiring job I think and to get rid of those horrible Chinese pins and messy wiring by doing a straight-forward single cable and socket and plug approach to the controller. I have my own little workshop and soldering iron, so it's something I can try. I had planned to put everything inside a small ABS box (with the Speedict) and hard wire everything with cables coming out or have a single connector on side for battery/PAS/throttle connector.
I did wonder if the connectors for the phase wires had become oxidised as I had that problem on my old bike and just giving them a light sand down, improved electrical conductivity.
Note: I don't know if you recall Dave, but I had that disaster early on in this build, where I suffered the rear inner blow-out and had to ride the bike 2 miles on the rim! It didn't do the rim any good, and who knows what it did to the motor/sensors? Maybe there was some damage eh? I tried to wheel it back but rode it partly too, as I was knackered and freezing and just wanted to get home..was in middle of winter and was middle of nowhere at night!